PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01384.1.g00050.1.am.mkhc
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family S1Fa-like
Protein Properties Length: 135aa    MW: 14925.2 Da    PI: 10.4694
Description S1Fa-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01384.1.g00050.1.am.mkhcgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1S1FA35.12.7e-1168100233
                            S1FA   2 avakvea.kGlnPGlivllvvgglllvflvgny 33 
                                     +va++++ kGlnPG+i llvv+++ll+f+v  y
  Zpz_sc01384.1.g00050.1.am.mkhc  68 NVAIEDViKGLNPGMIALLVVASFLLLFFVRKY 100
                                     45556668**********************887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF046892.0E-774100IPR006779DNA binding protein S1FA
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    Send to blast
MWYVRAHGVI VLPHLQGGDD DQDTGAMSDG GASSASNFNI LGGLKTPPVK RKRGCPSSKR  60
DKPGYENNVA IEDVIKGLNP GMIALLVVAS FLLLFFVRKY DRRRFLLRKR IGLKEAEEGK  120
AEAGHPRQES KKLHN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP4296133